CDS
| Accession Number | TCMCG006C24731 |
| gbkey | CDS |
| Protein Id | XP_022551909.1 |
| Location | complement(join(27882809..27882871,27882988..27883104,27883210..27883344,27883433..27883990,27884113..27884172,27884257..27884322,27884407..27884517,27884599..27884689,27884801..27884901,27885008..27885115,27885216..27885739,27885808..27886894,27887026..27887031)) |
| Gene | LOC111202932 |
| GeneID | 111202932 |
| Organism | Brassica napus |
Protein
| Length | 1008aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_022696188.1 |
| Definition | eukaryotic translation initiation factor 5B-like isoform X1 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | J |
| Description | Contains the following InterPro domains Small GTP-binding protein (InterPro IPR005225), Translation elongation factor EFTu EF1A, domain 2 (InterPro IPR004161), Translation initiation factor 2 related (InterPro IPR015760), Protein synthesis factor, GTP-binding (InterPro IPR000795) |
| KEGG_TC | - |
| KEGG_Module |
M00161
[VIEW IN KEGG] |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko00194 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko03012 [VIEW IN KEGG] |
| KEGG_ko |
ko:K02703
[VIEW IN KEGG] ko:K03243 [VIEW IN KEGG] |
| EC |
1.10.3.9
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00195
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko03013 [VIEW IN KEGG] map00195 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map03013 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGGATCGGAAGAACACGAGCGCGTGTAGAGGAGACGAAGATCATCCCTTTGCCTTGTCCTCCAAGGGAGGTGAAAACCCTAAGAATAAATCATATAATGTAAGGTTTGATCTGCTTGGTATTGAAGATTACGAGGAAGAGACAGGGGATGATGTTAATGTTGAATTGAGTGATGAGTTAATGCTTGGAATACAAGTTAACGAAGAAACTAATACTAAGAGTGATGATGTTGGGGAAACCTCGAGGAGTAAGAAAAAGAAGAAGAACAAGAGTGGAAAGACTCCACATAAAGAAGAAGATTTGGACAAGATTCTTGCAGAGCTTGGGATCACTCCTGTTTCACCAGCACAACCTGAGCTAGTTCCACCAGCAGAAGATGGCTCAAAGGATGGAGAAGAAGAGACTGTCGTGTCAGTTTCAGCGAAGAAAAGGAAAAAGAAGAAGGACAAGGACAATAAAGTGTCTGCTTCTTCCGTGGAAGCTAAGGATGGGCCATCACAGCCTCATAAGAAAGTTCCTAAACACATTCTAGAGATGCAAGAGATGGTTGCGCGGCGGAAAGAAGCTGAAGAGATGAAGAAGAAGGAAGAGGAAGAGAAGTTGAGGAAAGAGGAAGAGGAGCGCCGCATTCAGGAAGAGCGAGAAAGGGGAGCTGAAGAGATTAAACAGAAGAGGAAGATAAGGGAAAAGGAGAAGATGCTGAAGAAGAAGCAAGAAGGAGGGATTCTTACAGAGAAGCAGAAGAGGGACAAGGCTTACAAGAACAAGATGTTGTCTGACGCTGGAATGCTTCTTGCTTCGGATAAGAACACTGATTCTTCAAAGCGTCCCGTTTATGGCAACAAAAGAAAACCAGCTCGCGCAAAAGAAAACGACTCTGCTTCTGTCCTGACAAAAGAGAAACATGCAGATGTAGTACCTTCACCTGAGCCGGATAAGAAAGAAGAAGCTGGTGATGAGGAGGATGATTGGGAAGCAAAAAGTGATGATTCTGTTAATATAATGGGTGATTATGATGATGATGGGGAAGATACACCTTGGCTTGTGATTAAGAAAGAGATCAAAGACACTGCTTCAAAGGCCCATTATTCAGGTATCAATACAGGTCCTGTCACTGATAGACTAGCATTGAAGGCTGGAGTTTCGTGCAAGCCACAAAAATCTAAACCTAAAATGGATGATGCTACTAAAAGGAGTAATGACGACTCAGTAGTTAATGAAGTTGCTAAAGAAAGTCTTCGGTCTCCCATTTGCTGCATCATGGGACATGTTGATACTGGTAAAACAAAGCTGTTGGACTGCATCAGAGGAACAAATGTTCAGGAAGGAGAAGCTGGAGGTATCACTCAGCAGATTGGTGCAACTTATTTCCCTGCAGAAAACATCCGTGAGAGGACCAAGGAGTTAAGACCTGATGCAAAACTCAAGGTGCCAGGTCTATTGGTTATTGATACGCCAGGACACGAGTCATTCTCAAATCTACGGTCAAGGGGTTCAAACTTGTGTGACATTGCAATTCTAGTGGTTGACATAATGCATGGTCTAGAGCCACAAACCATAGAGTCTCTTAATCTTTTGAGAAAGAGGAACACAGAGTTCATTGTTGCCTTGAATAAGGTTGATAGGCTATATGGGTGGAAAACATGCAAGAATGCTCCTATAGAGAAGGCTTTGGCGCTGCAATCCAAAGATGTGGTTATTGAATTTAACATGAGGCTCACTCATGTTATAACCCAGTTCAAAGAACAAGGACTCAACACTGAGATTTATTACAAGAACAAAGAAATGGGAGACACTTTCAGTATTGTGCCTACTAGTGCTATCAGTGGGGAAGGAATTCCAGATCTGTTGCTATATTTGGTTATGTGGTCTCAGAAAACAATGGTTGAGAAACTTACATTTGTTGACAAAGTGCAGTGTACCGTCCTTGAGGTCAAAGTTATTCCAGGCCATGGTACAACAATTGATGTTATTTTGGTCAACGGTGTACTCCATGAAGGTGATCAAATCGTTGCTTGTGGGTCACAGGGACCAATTATAACAACTGTTAGATCATTATTGACTCCTCATCCCATGAAAGAGCTACGTGTGAAGGGTACATATCTGCATCATAGAAAAGTAAAGGCTGCGCAATGTATCAAGATTACTGCACAGGGACTTGAACACGCCGTTGCTGGTACTTCCTTACATGTGATTGGACCTGATGTGGACATAGAAGAAGCCAAGAAAACTGCCATGGAAGATATGAAGTCAATCATGAGCTGGGTTGACAAAAGCGGTGAAGGAGTTTATGTACAAGCTTCAACGTTAGGGTCCCTGGAAGCATTACTAGAGTTCTTGAAGTCACCAGATGTGAAAATACCTGTCAGTGGTATTGGCCTAGGACCAGTGCATAAAAAGGATATCATGAAGGCCGGAGTAATGCTAGAGAAGAAGAAAGAGTACGCTACGGTTTTGGCTTTTGACGTGAAGATAACTACAGAGGCTCGTGAACTAGCTGACAACATGGGAGTCAAGATATTCTGCGCTGATATTATCTATCATCTGTTTGATCAGTTCAAGGGTTATGTCAAGGGTGTCCGAGATGAAGAAAGGAAAGAAACAGCATCTGAAGTAGTGTTTCCATGTGTCCTTAAGATTTTACCAAACAATGTCTTCAAAAGAGGAAACCCCATCATCCTTGGAGTTGAGGTCATCGATGGTATACTCAAGGTTGGAACTCCCATATGCTTTCTAAAAGAGATTGGGAAGTCGAGAGTGTTTCTGGATCTTGGTCGCGTTGCATCTATTCATAAAGACAAGAAGCCACTTGACGACGCCAAGAAAGGACAGCAGGTTGCTATTAAGATCATTGCCTCTAACCCTGGAGAAGAGAAAACGTTTGGAGAGGACTTTGGTATAGAAGACGAGCTTGTCAGTCATATTTCTAGGAGATCCATCGACATACTCAAAACACTCTACAGGGATGAGTTGAAGAGCGAGTTCAAGCTTGTTTTGAAACTTAAAATGTTGTTCAAGATACAATAG |
| Protein: MDRKNTSACRGDEDHPFALSSKGGENPKNKSYNVRFDLLGIEDYEEETGDDVNVELSDELMLGIQVNEETNTKSDDVGETSRSKKKKKNKSGKTPHKEEDLDKILAELGITPVSPAQPELVPPAEDGSKDGEEETVVSVSAKKRKKKKDKDNKVSASSVEAKDGPSQPHKKVPKHILEMQEMVARRKEAEEMKKKEEEEKLRKEEEERRIQEERERGAEEIKQKRKIREKEKMLKKKQEGGILTEKQKRDKAYKNKMLSDAGMLLASDKNTDSSKRPVYGNKRKPARAKENDSASVLTKEKHADVVPSPEPDKKEEAGDEEDDWEAKSDDSVNIMGDYDDDGEDTPWLVIKKEIKDTASKAHYSGINTGPVTDRLALKAGVSCKPQKSKPKMDDATKRSNDDSVVNEVAKESLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELRPDAKLKVPGLLVIDTPGHESFSNLRSRGSNLCDIAILVVDIMHGLEPQTIESLNLLRKRNTEFIVALNKVDRLYGWKTCKNAPIEKALALQSKDVVIEFNMRLTHVITQFKEQGLNTEIYYKNKEMGDTFSIVPTSAISGEGIPDLLLYLVMWSQKTMVEKLTFVDKVQCTVLEVKVIPGHGTTIDVILVNGVLHEGDQIVACGSQGPIITTVRSLLTPHPMKELRVKGTYLHHRKVKAAQCIKITAQGLEHAVAGTSLHVIGPDVDIEEAKKTAMEDMKSIMSWVDKSGEGVYVQASTLGSLEALLEFLKSPDVKIPVSGIGLGPVHKKDIMKAGVMLEKKKEYATVLAFDVKITTEARELADNMGVKIFCADIIYHLFDQFKGYVKGVRDEERKETASEVVFPCVLKILPNNVFKRGNPIILGVEVIDGILKVGTPICFLKEIGKSRVFLDLGRVASIHKDKKPLDDAKKGQQVAIKIIASNPGEEKTFGEDFGIEDELVSHISRRSIDILKTLYRDELKSEFKLVLKLKMLFKIQ |